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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015885498.1_cds_XP_016439520.1_35067
CDS Infomation

[gene=LOC107765396] [db_xref=GeneID:107765396] [protein=metacaspase-1-like] [protein_id=XP_016439520.1] [location=join(21644..22070,22400..22730,22799..22913,23189..23347,23431..23490)] [gbkey=CDS]
Sequence

ATGGACAGCAGGAGATGCAAATGCAACTGGTGCGGCACGAAAATGTCAGCTCCCATTGGA
GCACAAACCATTTCCTGCCCAAGGTGCCAATCTGTTACACAACTCCAACCTCCAAGAAAC
AACAACGGCTTTGCCAATGGGGTTATTAACAATATTGTGGGCGCAGTAGTTAACACAGCT
TTTTCTGCAAGGCCAGGAAGGATGAATCCAAATGCCAATAATTCTCAGCCTCAACCGTTC
AACATGTCACCACAGATTACTATGCGACCTCCAGCGGTGCATGGCCGAAAACGAGCAGTT
CTCTGTGGAATTACTTACCGTGGTCATTCCAAGAGTCTGAAAGGAAGCATTAACGACGTT
TTATCCATGAGATATCTTCTGGTTGAGAAGTTGGGTTTCCCCAATGCATCTGTACTTGTC
CTTACAGAGGATGAGAAAGATCCATACAAAATCCCAACCAAGGGCAATATCAGGTCAGCC
CTACGTTGGCTTGTTCATGGTTGCCAGCCAGGAGATTCACTAGTGTTCCATTACTCTGGC
CATGGCACACGAGTAAGAGACCGCGACGGTGATGAGGTTGATGGGCATGATGAATCACTA
TGCCCTGTTGATTTTGAGAGTGAAGGAAGAATACTAGATGACGAGATCAATAATACCATT
GTTAGGCCTTTACCTCGTGGAGCCACACTTCATGGCATAATTGATACTTGCTTCAGTGGA
ACTTTCCTAGATTTGCCATTTATGTGCAGAATAAACAGGGCGGGATACTTTATGTGGGAA
GACCATCGTATCAGCACATTCAAAGGTACCAGAGGAGGAACAGCAATCTCTATCAGTGCC
TGTGATGATCATCAAAATTCTGGAGATACAACGGCTTTCACAGGCTTTCCGACGGGTGCC
CTGACATATAGTTTCATCAAAACATTGGAGCAAGAAACTAAATTGACCTATGGACGCTTA
CTTATGAGTATGCACAATAAGATTCATGAAGCACAGAAAGGAGTAGGCATGAATGGTGCA
AATGAAACTCAGGAGCCTCAACTATCCGCCTCTGAGCAGTTTGATATTCACTCGAAGATG
GTGGCTATATAG

Peptide Sequence

PEP ID

XP_016439520.1
PEP Infomation

PREDICTED: metacaspase-1-like [Nicotiana tabacum]
Sequence

MDSRRCKCNWCGTKMSAPIGAQTISCPRCQSVTQLQPPRNNNGFANGVINNIVGAVVNTA
FSARPGRMNPNANNSQPQPFNMSPQITMRPPAVHGRKRAVLCGITYRGHSKSLKGSINDV
LSMRYLLVEKLGFPNASVLVLTEDEKDPYKIPTKGNIRSALRWLVHGCQPGDSLVFHYSG
HGTRVRDRDGDEVDGHDESLCPVDFESEGRILDDEINNTIVRPLPRGATLHGIIDTCFSG
TFLDLPFMCRINRAGYFMWEDHRISTFKGTRGGTAISISACDDHQNSGDTTAFTGFPTGA
LTYSFIKTLEQETKLTYGRLLMSMHNKIHEAQKGVGMNGANETQEPQLSASEQFDIHSKM
VAI

Transcript Sequence

Gene sequence data has not been registered.